Pantothenate derivatives for the treatment of neurologic disorders

ABSTRACT

The present disclosure relates to pantothenate derivatives for the treatment of neurologic disorders (such as pantothenate kinase-associated neurodegeneration), pharmaceutical compositions containing such compounds, and their use in treatment of neurologic disorders.

This application claims the benefit of U.S. Provisional Application No.61/639,602, filed Apr. 27, 2012, the entire contents of which are herebyincorporated by reference.

FIELD OF THE INVENTION

The present invention relates to pantothenate derivatives for thetreatment of neurologic disorders (such as pantothenatekinase-associated neurodegeneration), pharmaceutical compositionscontaining such compounds, and their use in treatment of neurologicdisorders.

BACKGROUND

Pantothenate kinase-associated neurodegeneration (PKAN) is a form,thought to be responsible for half, of neurodegeneration with brain ironaccumulation (NBIA) that causes extrapyramidal dysfunction (e.g.,dystonia, rigidity, choreoathetosis) (A. M. Gregory and S. J. Hayflick,“Neurodegeneration With Brain Iron Accumulation”, Orphanet Encyclopedia,September 2004). PKAN is thought to be a genetic disorder resulting fromlack of the enzyme pantothenate kinase, which is responsible for theconversion of pantothenate (vitamin B-5) to 4′-phosphopantothenate.4′-Phosphopantothenate is subsequently converted into Coenzyme A (CoA)(as shown below) (R. Leonardi, Y.-M. Zhang, C. O. Rock, and S.Jackowski, “Coenzyme A: Back In Action”, Progress in Lipid Research,2005, 44, 125-153).

In particular, pantothenate is converted to 4′-phosphopantothenate viathe enzyme pantothenate kinase (PANK), which is converted to4′-phosphopantothenoylcysteine via the enzyme4′-phosphopantothenoylcysteine synthase (PPCS), and subsequentlydecarboxylated to 4′-phosphopantethine via4′-phosphopantothenoylcysteine decarboxylase (PPCDC).4′-phosphopantethine is then appended to adenosine by the action ofphosphosphpantethine adenyltransferease (PPAT) to afford dephospho CoA,which is finally converted to coenzyme A (CoA) via dephospho-CoA kinase(DPCK).

Classic PKAN usually presents in a child's first ten to fifteen years,though there is also an atypical form that can occur up to age 40. PKANis a progressively degenerative disease, that leads to loss ofmusculoskeletal function with a devastating effect on quality of life.

One approach to treating PKAN could be to use the product of the enzymicreaction, namely, 4′-phosphopantothenate. This approach has beenmentioned in the literature, but it has been recognized that the highlycharged molecule would not be able to permeate the lipohilic cellmembrane (C. J. Balibar, M. F. Hollis-Symynkywicz, and J. Tao,“Pantethine Rescues Phosphopantothenoylcysteine Synthetase AndPhosphopantothenoylcysteine Decarboxylase Deficiency In Escherichia ColiBut Not In Pseudomonas Aeruginosa”, J. Bacteriol., 2011, 193,3304-3312).

SUMMARY OF THE INVENTION

The present invention relates to prodrugs of 4′-phosphopantothenate or asurrogate for 4′-phosphopantothenate. These prodrugs have greater cellpermeability than 4′-phosphopantothenate. Without wishing to be bound byany particular theory, it is believed that the replacement of4′-phosphopantothenate, or the use of a surrogate for it, will permitthe body to synthesize CoA or an active variant of it. Thus, theseprodrugs are useful for treating disorders resulting from a deficiencyof 4′-phosphopantothenate and/or CoA.

One embodiment of the present invention is a prodrug of4′-phosphopantothenate(3-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]amino}propanoicacid). The prodrug may have one or more prodrug moieties attached to the4′-phosphopantothenate. Preferably, these prodrug moieties reduce thecharge of the compound thereby enhancing its cell permeability. In oneembodiment, one or more prodrug moieties are attached to the carboxylgroup and/or the phosphono group of the 4′-phosphopantothenate. In apreferred embodiment, the prodrug has one prodrug moiety bound to thecarboxyl group and two prodrug moieties attached to the phosphono group.In one more preferred embodiment, the hydrogen on one hydroxyl group ofthe phosphono moiety is replaced with a prodrug moiety, and the otherhydroxyl group of the phosphono moiety is replaced with an amino group(e.g., an amino acid, attached through its amino group to thephosphorous atom).

In one embodiment, the present invention relates to a prodrug of4′-phosphopantothenate or other compound of the present invention thatdoes not form an ion at physiological pH (e.g., at a pH of between about7.3 and about 7.5, such as at a pH of between about 7.3 and about 7.4,such as at a pH of about 7.4 or at a pH of about 7.365).

In another embodiment, the present invention relates to a prodrug of4′-phosphopantothenate or other compound of the present invention havinga pKa value of about 7.

Another embodiment of the present invention is a compound having theformula:

or a pharmaceutically acceptable salt thereof, wherein

X is hydroxy, halogen, —OR⁶, or —SR⁶ (where R⁶ is a C₁-C₆ alkyl, C₂-C₆alkenyl, or C₂-C₆ alkynyl, such as methyl, ethyl, n-propyl, i-propyl,n-butyl, s-butyl);

Q is a carboxylic acid (—COOH), a sulfinic acid (—SOOH), a sulfonic acid(SOOOH), or an ester thereof (i.e., —COOR¹, —SOOR¹, —SOOOR¹);

R¹ is selected from substituted or unsubstituted C₁-C₆ alkyl,substituted or unsubstituted C₂-C₆ alkenyl, substituted or unsubstitutedC₂-C₆ alkynyl, substituted or unsubstituted C₃-C₈ cycloalkyl,substituted or unsubstituted C₃-C₈ cycloalkenyl, substituted orunsubstituted C₃-C₈ cycloalkyl(C₁-C₆ alkyl), substituted orunsubstituted C₃-C₈ cycloalkenyl(C₁-C₆ alkyl), substituted orunsubstituted aryl, substituted or unsubstituted arylalkyl, substitutedor unsubstituted heterocyclyl, substituted or unsubstituted heteroaryl,substituted and unsubstituted heterocyclylalkyl, and substituted andunsubstituted heteroarylalkyl;

(a) Z is a phosphonate (—CH₂P(O)OR²), phosphate (—OP(O)OR³R⁴), athiophosphonate (—CH₂P(S)OR²), a thiophosphate (—OP(S)OR³R⁴),

R², R³, and R⁴ are independently selected from substituted orunsubstituted C₁-C₆ alkyl, substituted or unsubstituted C₂-C₆ alkenyl,substituted or unsubstituted C₂-C₆ alkynyl, substituted or unsubstitutedC₃-C₈ cycloalkyl, substituted or unsubstituted C₃-C₈ cycloalkenyl,substituted or unsubstituted C₃-C₈ cycloalkyl(C₁-C₆ alkyl), substitutedor unsubstituted C₃-C₈ cycloalkenyl(C₁-C₆ alkyl), substituted orunsubstituted aryl, substituted or unsubstituted arylalkyl, substitutedor unsubstituted heterocyclyl, substituted or unsubstituted heteroaryl,substituted and unsubstituted heterocyclylalkyl, and substituted andunsubstituted heteroarylalkyl;

R⁵ is selected from substituted or unsubstituted C₁-C₆ alkyl (such asunsubstituted C₁-C₆ alkyl), substituted or unsubstituted C₂-C₆ alkenyl,substituted or unsubstituted C₂-C₆ alkynyl, substituted or unsubstitutedC₃-C₈ cycloalkyl, substituted or unsubstituted C₃-C₈ cycloalkenyl,substituted or unsubstituted C₃-C₈ cycloalkyl(C₁-C₆ alkyl), substitutedor unsubstituted C₃-C₈ cycloalkenyl(C₁-C₆ alkyl), substituted orunsubstituted aryl, substituted or unsubstituted arylalkyl, substitutedor unsubstituted heterocyclyl, substituted or unsubstituted heteroaryl,substituted and unsubstituted heterocyclylalkyl, and substituted andunsubstituted heteroarylalkyl;

Y is a natural or unnatural amino acid ester of the formula

R⁷ is selected from substituted or unsubstituted C₁-C₆ alkyl (such asunsubstituted C₁-C₆ alkyl), substituted or unsubstituted C₂-C₆ alkenyl,substituted or unsubstituted C₂-C₆ alkynyl, substituted or unsubstitutedC₃-C₈ cycloalkyl, substituted or unsubstituted C₃-C₈ cycloalkenyl,substituted or unsubstituted C₃-C₈ cycloalkyl(C₁-C₆ alkyl), substitutedor unsubstituted C₃-C₈ cycloalkenyl(C₁-C₆ alkyl), substituted orunsubstituted aryl, substituted or unsubstituted arylalkyl, substitutedor unsubstituted heterocyclyl, substituted or unsubstituted heteroaryl,substituted and unsubstituted heterocyclylalkyl, and substituted andunsubstituted heteroarylalkyl;

R⁸ and R⁹ are independently selected from hydrogen, amino acid sidechains, C₁-C₆ alkyl, substituted or unsubstituted C₂-C₆ alkenyl,substituted or unsubstituted C₂-C₆ alkynyl, substituted or unsubstitutedC₃-C₈ cycloalkyl, substituted or unsubstituted C₃-C₈ cycloalkenyl,substituted or unsubstituted C₃-C₈ cycloalkyl(C₁-C₆ alkyl), substitutedor unsubstituted C₃-C₈ cycloalkenyl(C₁-C₆ alkyl), substituted orunsubstituted aryl, substituted or unsubstituted arylalkyl, substitutedor unsubstituted heterocyclyl, substituted or unsubstituted heteroaryl,substituted and unsubstituted heterocyclylalkyl, and substituted andunsubstituted heteroarylalkyl;

with the proviso that R⁸ and R⁹ are not both hydrogen.

In one preferred embodiment, the amino acid side chain in the definitionof R⁸ and R⁹ is that of a natural amino acid (e.g., an L-amino acid). Informula F, R⁸ and R⁹ may be attached to the carbon depicted such thatthe carbon has the R or S absolute configuration (D or L relativeconfiguration). In a more preferred embodiment, one of R⁸ and R⁹ ishydrogen and the other is an amino acid side chain (preferably, an aminoacid side chain of a natural L-amino acid, such as a proteinogenic aminoacid).

Another embodiment is a compound having the formula:

or a pharmaceutically acceptable salt thereof, wherein

R is an amino acid side chain;

R′ is selected from C₁-C₆ alkyl substituted or unsubstituted C₁-C₆ alkyl(such as unsubstituted C₁-C₆ alkyl), substituted or unsubstituted C₂-C₆alkenyl, substituted or unsubstituted C₂-C₆ alkynyl, substituted orunsubstituted C₃-C₈ cycloalkyl, substituted or unsubstituted C₃-C₈cycloalkenyl, substituted or unsubstituted C₃-C₈ cycloalkyl(C₁-C₆alkyl), substituted or unsubstituted C₃-C₈ cycloalkenyl(C₁-C₆ alkyl),substituted or unsubstituted aryl, substituted or unsubstitutedarylalkyl, substituted or unsubstituted heterocyclyl, substituted orunsubstituted heteroaryl, substituted and unsubstitutedheterocyclylalkyl, and substituted and unsubstituted heteroarylalkyl;and

R″ is selected from substituted or unsubstituted C₁-C₆ alkyl,substituted or unsubstituted C₂-C₆ alkenyl, substituted or unsubstitutedC₂-C₆ alkynyl, substituted or unsubstituted C₃-C₈ cycloalkyl,substituted or unsubstituted C₃-C₈ cycloalkenyl, substituted orunsubstituted C₃-C₈ cycloalkyl (C₁-C₆ alkyl), substituted orunsubstituted C₃-C₈ cyclo alkenyl (C₁-C₆ alkyl), substituted orunsubstituted aryl, substituted or unsubstituted arylalkyl, substitutedor unsubstituted heterocyclyl, substituted or unsubstituted heteroaryl,substituted and unsubstituted heterocyclylalkyl, and substituted andunsubstituted heteroarylalkyl.

In one preferred embodiment, the amino acid side chain in the definitionof R is that of a natural amino acid (e.g., a natural L-amino acid). Rmay be attached to the carbon depicted such that the carbon has the R orS absolute configuration (D or L relative configuration). In a morepreferred embodiment, R is the side chain of a proteinogenic amino acid.In one preferred embodiment, the stereochemistry of the R group is suchthat the molecule has the following stereochemistry:

In one embodiment of the compound of formula G, R′ is C₁-C₆ alkyl (e.g.,methyl, ethyl, n-propyl, i-propyl, n-butyl, i-butyl, t-butyl), benzyl,cyclohexyl, and methylcyclopropyl.

In one embodiment of the compound of formula G, R″ is C₁-C₆ alkyl (e.g.,methyl, ethyl, n-propyl, i-propyl, n-butyl, i-butyl, t-butyl), benzyl,cyclohexyl, and methylcyclopropyl.

Another embodiment is a compound having the formula:

or a pharmaceutically acceptable salt thereof, wherein

R is an amino acid side chain;

X is halogen (e.g., F);

n is 0, 1, 2, 3, 4 or 5 (e.g., 0, 1 or 2);

R′ is selected from C₁-C₆ alkyl, C₂-C₆ alkenyl, C₂-C₆ alkynyl, C₃-C₈cycloalkyl, C₃-C₈ cycloalkenyl, C₃-C₈ cycloalkyl(C₁-C₆ alkyl), C₃-C₈cycloalkenyl(C₁-C₆ alkyl), aryl, arylalkyl, heterocyclyl, heteroaryl,heterocyclylalkyl, and heteroarylalkyl; each of which is optionallysubstituted by one or more halogen (e.g., fluorine); and

R″ is selected from C₁-C₆ alkyl, C₂-C₆ alkenyl, C₂-C₆ alkynyl, C₃-C₈cycloalkyl, C₃-C₈ cycloalkenyl, C₃-C₈ cycloalkyl(C₁-C₆ alkyl), C₃-C₈cycloalkenyl(C₁-C₆ alkyl), aryl, arylalkyl, heterocyclyl, heteroaryl,heterocyclylalkyl, and heteroarylalkyl; each of which is optionallysubstituted by one or more halogen (e.g., fluorine).

In one preferred embodiment, n is 0. In another preferred embodiment nis 1.

In one preferred embodiment, the amino acid side chain in the definitionof R is that of a natural amino acid (e.g., a natural L-amino acid). Rmay be attached to the carbon depicted such that the carbon has the R orS absolute configuration (D or L relative configuration). In a morepreferred embodiment, R is the side chain of a proteinogenic amino acid.In one preferred embodiment, the stereochemistry of the R group is suchthat the molecule has the following stereochemistry:

In one embodiment of the compound of formula H, R′ is C₁-C₆ alkyl (e.g.,methyl, ethyl, n-propyl, i-propyl, n-butyl, i-butyl, or t-butyl),benzyl, cyclohexyl, or methylcyclopropyl, each of which is optionallysubstituted by one or more halogen (e.g., fluorine).

In one embodiment of the compound of formula H, R″ is C₁-C₆ alkyl (e.g.,methyl, ethyl, n-propyl, i-propyl, n-butyl, i-butyl, or t-butyl),benzyl, cyclohexyl, or methylcyclopropyl, each of which is optionallysubstituted by one or more halogen (e.g., fluorine).

Preferred compounds of the present invention include those having theformula:

or a pharmaceutically acceptable salt thereof, wherein

R (AA) R′ R″ L-Ala Et Et L-Ala Me Me L-Ala n Bu n Bu L-Ala Bn Et L-AlaEt Bn L-Ala Bn Bn L-Ala MeCyPr MeCyPr Gly Et Et Gly Bn Bn Gly Bn Et GlyEt Bn L-Val Et Et L-Trp Me Me L-Trp Et Et L-Trp Bn Et L-Trp Et Bn L-TrpBn Bn(wherein Bn is benzyl, Cy is cyclohexyl, Et is ethyl, hex is hexyl, iBuis isobutyl, iPr is isopropyl, Me is methyl, MeCyPr is methylcyclopropyl(i.e., —CH₂-cyclopropyl, and MeIndole is (1H-indol-3-yl)methyl). In oneembodiment, the compounds mentioned above have the followingstereochemistry:

Yet another embodiment is a pharmaceutical composition comprising acompound of the present invention, and a pharmaceutically acceptableexcipient. In one embodiment, the pharmaceutical composition includes aneffective amount of the compound to treat a neurologic disorder. Thepharmaceutical composition may be a dosage unit form, such as a tabletor capsule.

Yet another embodiment is a method of treating a disorder associatedwith a deficiency of pantothenate kinase, 4′-phosphopantothenate, orCoenzyme A in a subject. The method comprises administering to thesubject an effective amount of a compound of the present invention.

Yet another embodiment is a method of treating pantothenatekinase-associated neurodegeneration in a subject. The method comprisesadministering to the subject an effective amount of a compound of thepresent invention. The subject may suffer from neurodegeneration withbrain iron accumulation.

Yet another embodiment is a method of treating Parkinson's disease in asubject. The method comprises administering to the subject an effectiveamount of a compound of the present invention.

Yet another embodiment is a method of treating cells or tissue involvedin a pathology characterized by abnormal neuronal function in a subject.The method comprises administering to the subject an effective amount ofa compound of the present invention. The pathology may be selected fromdystonia, extrapyramidal effects, dysphagia, rigidity and/or stiffnessof limbs, choreoathetosis, tremor, dementia, spasticity, muscleweakness, and seizure.

Yet another embodiment is a method of treating cells or tissues involvedin a pathology characterized by dysfunctional neuronal cells caused bymisregulation of the gene associated with the enzyme pantothene kinase.The method comprises administering to the subject an effective amount ofa compound of the present invention.

Yet another embodiment is a method of treating a pathology characterizedby dysfunctional neuronal cells caused by misregulation of the geneassociated with the enzyme pantothene kinase in a subject. The methodcomprises administering to the subject an effective amount of a compoundof the present invention.

Yet another embodiment is a method of treating cells or tissues involvedin a pathology characterized by dysfunctional neuronal cells caused bymisregulation of the expression of the gene associated with the enzymepantothene kinase. The method comprises administering to the subject aneffective amount of a compound of the present invention.

Yet another embodiment is a method of treating a pathology characterizedby dysfunctional neuronal cells caused by misregulation of theexpression of the gene associated with the enzyme pantothene kinase in asubject. The method comprises administering to the subject an effectiveamount of a compound of the present invention.

Yet another embodiment is a method of treating a subject having neuronalcells with an over accumulation of iron. The method comprisesadministering to the subject an effective amount of a compound of thepresent invention.

In the aforementioned methods, the subject may be a child (for example,10 to 15 years old) or an adult.

Yet another embodiment is a method of preparing a compound of formula Gor H by:

(a) protecting both hydroxyl groups of pantothenic acid;

(b) esterifying the acid moiety of the protected pantothenic acid toform a compound of the formula:

where each Pg independently represent a protecting group, and R″ isdefined as above with respect to formula G or H;

(c) deprotecting the hydroxyl groups;

(d) phosphorylating the deprotected compound with a compound of theformula:

wherein L is a leaving group (e.g., halogen such as chloro), and R andR′ are defined as above with respect to formula G or H; and

(e) optionally, forming a salt of the compound formed in step (d).

Yet another embodiment is a method of preparing a compound of formula Gor H by:

(a) esterifying pantothenic acid with an alcohol of the formula R″OH toform a compound of the formula:

wherein R″ is defined as above with respect to formula G or H;

(b) phosphorylating the esterified compound with a compound of theformula:

wherein L is a leaving group (e.g., halogen), and R and R′ are definedas above with respect to formula G or H; and

(c) optionally, forming a salt of the compound formed in step (b). Theesterification in step (a) can be performed by subjecting pantothenicacid to Fischer esterification conditions.

BRIEF DESCRIPTION OF THE DRAWINGS

FIG. 1 is a bar graph showing the levels of acetyl CoA in human HEK 293Tcells, as measured by mass spectrometry, following treatment with thecompounds of Examples 2, 5, 7 and 12.

FIG. 2 is a bar graph showing levels of mBBr CoA in untreatedPank^(1+/+) mice (WT), untreated Pank^(1−/—) knock out mice (pank1KO)and PANK knockout mice following administration of the compound ofExample 2 (Pank KO+Example 2).

DETAILED DESCRIPTION OF THE INVENTION Definitions

As used herein, certain items may have the following define meanings.

As used in the specification and claims, the singular for “a”, “an”, and“the” include plural references unless the context clearly dictatesotherwise. For example, the term “a cell” includes a plurality of cells,including mixtures thereof. Similarly, use of “a compound” for treatmentof preparation of medicaments as described herein contemplates using oneor more compounds of the invention for such treatment or preparationunless the context clearly dictates otherwise.

As used herein, the term “comprising” is intended to mean that thecompositions and methods include the recited elements, but not excludingothers. Thus, a composition consisting essentially of the elements asdefined herein would not exclude trace contaminants from the isolationand purification method and pharmaceutically acceptable carriers, suchas phosphate buffered saline, preservatives, and the like. “Consistingof” shall mean excluding more than trace elements of other ingredientsand substantial method steps for administering the composition of thisinvention. Embodiments defined by each of the transitional terms arewithin the scope of this invention.

The term “alkyl” refers to a straight or branched hydrocarbon chainradical consisting solely of carbon and hydrogen atoms, containing nounsaturation. Unless otherwise specified, the term “alkyl” refers to agroup having from one to eight carbon atoms (for example, one to sixcarbon atoms, or one to four carbon atoms), and which is attached to therest of the molecule by a single bond. Examples of alkyl groups include,but are not limited to, methyl, ethyl, n-propyl, i-propyl, n-butyl,t-butyl, s-butyl, n-pentyl, and s-pentyl.

The term “alkenyl ” refers to an aliphatic hydrocarbon group containinga carbon-carbon double bond and which may be a straight or branched orbranched chain. Unless otherwise specified, the term “alkenyl” refers toa group having 2 to about 10 carbon atoms, e.g., ethenyl, 1-propenyl,2-propenyl (allyl), iso-propenyl, 2-methyl-1-propenyl, 1-butenyl, and2-butenyl.

The term “alkynyl” refers to a straight or branched chain hydrocarbylradical having at least one carbon-carbon triple bond. Unless otherwisespecified, the term “alkynyl” refers to a group having in the range of 2up to about 12 carbon atoms (for instance, 2 to 10 2 to 10 carbonatoms), e.g., ethynyl, propynyl, and butnyl.

The term “cycloalkyl” denotes a non-aromatic mono or multicyclic ringsystem of about 3 to 12 carbon atoms such as cyclopropyl, cyclobutyl,cyclopentyl, and cyclohexyl.

The term “cycloalkylalkyl” refers to a cyclic ring-containing radicalcontaining in the range of about 3 up to 8 carbon atoms directlyattached to an alkyl group which is then attached to the main structureat any carbon in the alkyl group that results in the creation of astable structure such as cyclopropylmethyl, cyclobutylethyl, andcyclopentylethyl.

The term “aryl” refers to a mono- or multi-cyclic aromatic radicalhaving in the range of 6 up to 20 carbon atoms such as phenyl, naphthyl,tetrahydronapthyl, indanyl, and biphenyl.

The term “arylalkyl” refers to an aryl group as defined above directlybonded to an alkyl group as defined above, e.g., —CH₂C₆H₅, and—C₂H₅C₆H₅.

The term “heterocyclyl” refers to a non-aromatic 3 to 15 member ringradical which, consists of carbon atoms and at least one heteroatomselected from nitrogen, phosphorus, oxygen and sulfur. The heterocyclicring radical may be a mono-, bi-, tri- or tetracyclic ring system, whichmay include fused, bridged or spiro ring systems, and the nitrogen,phosphorus, carbon, oxygen or sulfur atoms in the heterocyclic ringradical may be optionally oxidized to various oxidation states. Inaddition, the nitrogen atom may be optionally quaternized.

The term “heterocyclylalkyl” refers to a heterocyclyl group as definedabove directly bonded to an alkyl group as defined above.

The term “heteroaryl” refers to an optionally substituted 5-14 memberaromatic ring having one or more heteroatoms selected from N, O, and Sas ring atoms. The heteroaryl may be a mono-, bi- or tricyclic ringsystem. Examples of such heteroaryl ring radicals includes but are notlimited to oxazolyl, thiazolyl imidazolyl, pyrrolyl, furanyl, pyridinyl,pyrimidinyl, pyrazinyl, benzofuranyl, indolyl, benzothiazolyl,benzoxazolyl, carbazolyl, quinolyl and isoquinolyl.

The term “heteroarylalkyl” refers to an heteroaryl group as definedabove directly bonded to an alkyl group as defined above, e.g.,—CH₂C₆H₄N, and —C₂H₅C₆H₄N.

The term “halogen” includes F, Cl, Br, and I.

The term “amino acid side chain” refers to the side chain R of an alphaamino acid of the formula H₂N—CH(R)—COOH. For example, the side chain ofalanine is methyl, the side chain of glycine is hydrogen, the side chainof valine is iso-propyl, and the side chain of tryptophan is(1H-indol-3-yl)methyl. Suitable amino acid side chains in the compoundsof the present invention include those of natural amino acids, includingproteinogenic amino acids. Non-limiting examples of natural amino acidsinclude Standard amino acids or proteinogenic amino acids include butare not limited to alanine, arginine, asparagine, aspartic acid,cysteine, glutamic acid, glutamine, glycine, histidine, isoleucine,leucine, lysine, methionine, phenylalanine, proline, pyrrolysine,selenocysteine, serine, threonine, tryptophan, tyrosine and valine.

The term “substituted”, unless otherwise specified, refers tosubstitution with any one or any combination of the followingsubstituents: hydrogen, hydroxy, halogen, carboxyl, cyano, nitro, oxo(═O), thio(═S), alkyl, alkoxy, alkenyl, alkynyl, aryl, arylalkyl,cycloalkyl, cycloalkenyl, aryl, heterocyclyl, heteroaryl, —COOR^(x),—C(O)R^(x), —C(S)R^(x), —C(O)NR^(x)R^(y), —C(O)ONR^(x)R^(y),—NR^(y)R^(z), —NR^(z)CONR^(y)R^(z), —N(R^(x))SOR^(y), —N(R^(x))SO₂R^(y),—(═N—N(R^(x))R^(y)), —NR^(x) C(O)OR^(y), —NR^(x)R^(y),—NR^(x)C(O)R^(y)—, —NR^(x)C(S)R^(y) —NR^(x)C(S)NR^(y)R^(z),—SONR^(x)R^(y)—, —SO₂ NR^(x)R^(y)—, —OR^(x), —OR^(x)C(O)NR^(y)R^(z),—OR^(x)C(O)OR^(y)—, —OC(O)R^(x), —OC(O)NR^(x)R^(y),—R^(x)NR^(y)C(O)R^(z), —R^(x)OR^(y), —R^(x)C(O)OR^(y),—R^(x)C(O)NR^(y)R^(z), —R^(x)C(O)R^(x), —R^(x)OC(O)R^(y), —SR^(x),—SOR^(x), —SO₂R^(x), and —ONO₂, wherein R^(x), R^(y) and R^(z) in eachof the above groups can be hydrogen atom, alkyl, alkoxy, alkenyl,alkynyl, aryl, arylalkyl, cycloalkyl, cycloalkenyl, amino, aryl,heteroaryl, heterocyclyl, or any two of R^(x), R^(y) and R^(z) may bejoined to form a saturated or unsaturated 3-10 member ring, which mayoptionally include heteroatoms which may be same or different and areselected from O, NH or S. In one embodiment, the term substituted refersto substitution with one or more halogens (e.g., fluorine).

The term “subject” refers to a mammal, such as a domestic pet (forexample, a dog or cat), or human. Preferably, the subject is a human.

The phrase “effective amount” refers to the amount which, whenadministered to a subject or patient for treating a disease, issufficient to effect such treatment for the disease.

“Treatment” or “treating” includes (1) inhibiting a disease in a subjector patient experiencing or displaying the pathology or symptomatology ofthe disease (e.g., arresting further development of the pathology and/orsymptomatology), (2) ameliorating a disease in a subject or patient thatis experiencing or displaying the pathology or symptomatology of thedisease (e.g., reversing the pathology and/or symptomatology), and/or(3) effecting any measurable decrease in a disease in a subject orpatient that is experiencing or displaying the pathology orsymptomatology of the disease.

Pharmaceutical Formulations and Routes of Administration

The compounds of the present invention may be administered by a varietyof routes including orally and by injection (e.g. subcutaneously,intravenously, and intraperitoneally).

The compounds may be administered orally in the form of a solid orliquid dosage form. In both, the compound may be coated in a material toprotect it from the action of acids and other natural conditions whichmay inactivate the compound. The compounds may be formulated as aqueoussolutions, liquid dispersions, (ingestible) tablets, buccal tablets,troches, capsules, elixirs, suspensions, syrups, and wafers. The oraldosage forms may include excipients known in the art, such as binders,disintegrating agents, flavorants, antioxidants, and preservatives.Liquid dosage forms may include diluents such as saline or an aqueousbuffer.

The compounds may also be administered by injection. Formulationssuitable for injection may include sterile aqueous solutions (wherewater soluble) or dispersions, and sterile powders for theextemporaneous preparation of sterile injectable solutions ordispersions. The composition may be sterile and be fluid to the extentthat easy syringability exists. It may be stable under the conditions ofmanufacture and storage and be preserved against the contaminatingaction of microorganisms such as bacteria and fungi. The carrier can bea solvent or dispersion medium containing, for example, water, ethanol,polyol (such as, glycerol, propylene glycol, and liquid polyethyleneglycol), suitable mixtures thereof, and vegetable oils. The properfluidity can be maintained, for example, by the use of a coating such aslecithin, by the maintenance of the required particle size in the caseof dispersion and by the use of surfactants. Prevention of the action ofmicroorganisms can be achieved by various antibacterial and antifungalagents, for example, parabens, chlorobutanol, phenol, and ascorbic acid.In many cases, it will be preferable to include isotonic agents, forexample, sugars, sodium chloride, or polyalcohols such as mannitol andsorbitol, in the composition. Prolonged absorption of the injectablecompositions can be brought about by including in the composition anagent which delays absorption, for example, aluminum monostearate orgelatin.

Sterile injectable solutions can be prepared by incorporating thetherapeutic compound in the required amount in an appropriate solventwith one or a combination of ingredients enumerated above, as required,followed by filtered sterilization. Generally, dispersions are preparedby incorporating the therapeutic compound into a sterile carrier whichcontains a basic dispersion medium and the required other ingredientsfrom those enumerated above. In the case of sterile powders for thepreparation of sterile injectable solutions, the methods of preparationinclude vacuum drying and freeze-drying which yields a powder of theactive ingredient (i.e., the therapeutic compound) plus any additionaldesired ingredient from a previously sterile-filtered solution thereof.

The actual dosage amount of the compound administered to a subject maybe determined by physical and physiological factors such as age, sex,body weight, severity of condition, the type of disease being treated,previous or concurrent therapeutic interventions, idiopathy of thesubject and on the route of administration. These factors may bedetermined by a skilled artisan. The practitioner responsible foradministration will typically determine the concentration of activeingredient(s) in a composition and appropriate dose(s) for theindividual subject.

In one embodiment, a human subject is administered the daily doses offrom about 0.01 mg/kg to about 100 mg/kg.

Single or multiple doses of the compounds are contemplated. Desired timeintervals for delivery of multiple doses can be determined by one ofordinary skill in the art employing no more than routineexperimentation. As an example, subjects may be administered two dosesdaily at approximately 12 hour intervals. In some embodiments, thecompound is administered once a day.

The compounds may be administered on a routine schedule. As used hereina routine schedule refers to a predetermined designated period of time.The routine schedule may encompass periods of time which are identicalor which differ in length, as long as the schedule is predetermined. Forinstance, the routine schedule may involve administration twice a day,every day, every two days, every three days, every four days, every fivedays, every six days, a weekly basis, a monthly basis or any set numberof days or weeks there-between. Alternatively, the predetermined routineschedule may involve administration on a twice daily basis for the firstweek, followed by a daily basis for several months. In otherembodiments, the invention provides that the agent(s) may taken orallyand that the timing of which is or is not dependent upon food intake.Thus, for example, the agent can be taken every morning and/or everyevening, regardless of when the subject has eaten or will eat.

Combination Therapy

In addition to being used as a monotherapy, the compounds may also finduse in combination therapies. Effective combination therapy may beachieved with a single composition or pharmacological formulation thatincludes both agents, or with two distinct compositions or formulations,administered at the same time, wherein one composition includes acompound of this invention, and the other includes the second agent(s).Alternatively, the therapy may precede or follow the other agenttreatment by intervals ranging from minutes to months.

The additional agent or agents may be selected from any agent or agentsuseful for treating a neurological disorder, for example any agent oragents useful for treating a deficiency of pantothenate kinase,4′-phosphopantothenate, or Coenzyme A. In one embodiment, the additionalagent or agent is useful in improving cognitive function, e.g., anacetylcholinesterase inhibitor, such as physostigmine, neostigmine,pyridostigmine, ambenonium, demarcarium, rivastigmine, galantamine,donezepil, and combinations thereof. In another embodiment, theadditional agent or agents is an iron chelator, such as deferiprone,deferoxamine, deferasirox, and combinations thereof.

Synthesis of Phosphopantothenate Derivatives

The compounds of the present invention can be prepared from pantothenicacid (vitamin B5), which is readily available. The synthesis ofpantothenic acid is described, for example, in U.S. Pat. Nos. 2,676,976and 2,870,188.

The following synthesis for preparing the compounds of formula G can beadapted to prepare other compounds of the present invention, such ascompounds of formula H. The compound of formula G can be prepared by (a)protecting both hydroxyl groups of pantothenic acid, (b) esterifying theacid moiety of the protected pantothenic acid to form a compound of theformula:

where each Pg independently represent a protecting group, and R″ isdefined as above with respect to formula G, (c) deprotecting thehydroxyl groups, (d) phosphorylating the deprotected compound with acompound of the formula:

wherein L is a leaving group (e.g., halogen), and R and R′ are definedas above with respect to formula G; and (e) optionally, forming a saltof the compound formed in step (d). This reaction scheme is shown below(where L is Cl):

(Note: R¹ in the last step can be hydrogen.)

The protection step (a) can be performed by treating pantothenic acidwith benzaldehyde and zinc chloride to afford the corresponding acetal(T. W. Green and P. G. M. Wuts, Protective Groups in Organic Synthesis,Wiley-Interscience, New York, 1999, 217-224, 716-719). The pantothenicacid may also be protected by treatment of pantothenic acid with acetoneand toluene sulfonic acid (M. Carmack and C. J. Kelley, “Synthesis ofoptically active Cleland's reagent [(−)-1,4-dithio-L-threitol]”, J. Org.Chem., 1968, 33, 2171-2173) to afford the corresponding acetal. Inanother example, pantothenic acid is treated with sodium hydridefollowed by benzyl bromide to afford the di-O-benzylated pantothenicacid (T. W. Green et al., supra).

After diprotection of the hydroxyl groups, formation of an ester (R″)may be accomplished by, for example, reacting the diprotectedpantothenic acid with an appropriate alcohol, anddicyclohexyldicarbodimide (DCC), or diethylazodicarboxylate (DEAD) andtriphenylphosphine (a Mitsunobu reaction). Alternatively, the protectedpantothenic acid can be converted to the corresponding acid chloride(for example, with thionyl chloride or oxalyl chloride), followed bytreatment with the corresponding alcohol.

Deprotection can be performed by any method known in the art, such asdescribed in T. W. Green et al., supra.

As an alternative to steps (a) to (c), pantothenic acid can beesterified with an alcohol of the formula R″OH, for example, bysubjecting pantothenic acid to Fischer esterification conditions (i.e.,excess alcohol, and catalytic acid under reflux).

The primary hydroxyl group on the compound formed in step (c) can beselectively phosphorylated. See J. D. Patrone, J. Yao, N. E. Scott, andG. D. Dotson, “Selective Inhibitors of BacterialPhosphopantothenoylcysteine Synthetase”, J. Am. Chem. Soc., 2009, 131,16340-16341). The conditions described in D. M. Lehsten, D. N. Baehr, T.J. Lobl, and A. R. Vaino, “An Improved Procedure for the Synthesis ofNucleoside Phosphoramidates”, Organic Process Research & Development,2002, 6, 819-822, can be used for this reaction.

This method is shown below with a method for preparating thephosphorylation reagent.

Optionally, an optically pure product can be obtained by performing achiral separation of the final product, or one of the intermediatesbetween steps in the synthesis.

Alternatively, the compounds of the present invention can be prepared bythe route described in B. S. Ross, P. G. Reddy, H.-R. Zhang, S.Rachakonda, and M, J. Sofia, “Synthesis of Diastereomerically PureNucleotide Phosphoramidates”, J. Org. Chem., 2011, 76, 8311-8319. Thisroute can produce an optically pure product without performing a finalchiral separation step.

EXAMPLES Example 1 Synthesis of ethyl3-((2R)-4-(((((S)-1-ethoxy-1-oxopropan-2-yl)amino)(phenoxy)phosphoryl)oxy)-2-hydroxy-3,3-dimethylbutanamido)propanoate

L-Alanine ethyl ester hydrochloride (0.50 g, 3.25 mmol) was suspended in10 mL of CH₂Cl₂ and treated with phenyl phosphorodichloridate (0.50 mL,3.35 mmol) at −10° C. and under an atmosphere of nitrogen. Thewell-stirred mixture was then treated dropwise with N-methylimidazole(1.0 mL, 12.5 mmol). After 1 hr. and still at −10° C., ethylpantothenate (0.70 g, 2.8 mmol) in 3 mL of CH₂Cl₂ was added slowly. Thismixture was allowed to warm to room temperature, and after 3 hrs, 2 mLof methanol was added. Extraction was performed sequentially with 1 MHCl, water, 5% NaHCO₃, and brine. The organic phase was dried (Na₂SO₄),and the solvent was evaporated affording 1.11 g of a clear, colorlesssyrup. This material was purified by flash column chromatography using30 g of silica gel and eluting with 1:1 EtOAc/hexanes containing 5%EtOH. The process was repeated until 1.1 g of phosphoramidate wasobtained. HPLC showed the product, as a 1:1 mixture of disastereomers,having a purity of 97%. ¹H NMR (300 MHz, CDCl₃): δ 1.08 (s, 3H, CH₃),1.21 (d, 3H, J=2.7 Hz, CH₃), 1.27 (m, 6H, CH₃), 1.35 (t, 3H, J=6.9 Hz,CH₃), 2.53 (q, 2H, J=4.2 Hz, CH₂), 3.50 (m, 2H, CH₂), 3.60 (m, 1H, CH),3.78 (d, J=7.5 Hz, CH), 3.9 (m, 2H, CH₂), 4.10 (m, 6H, CH₂), 4.79 (t,1H, J=6.5 Hz, CH), 7.15 and 7.40 (2 Ms, 5H, Ph). Expected Mol. Wt.502.21, Observed Mol. Wt. 503.09 (M+H⁺]

Example 2 Synthesis of methyl3-((2R)-2-hydroxy-4-(((((S)-1-methoxy-1-oxopropan-2-yl)amino)(phenoxy)phosphoryl)oxy)-3,3-dimethylbutanamido)propanoate

L-alanine methyl ester hydrochloride (1.35 g, 9.65 mmol) was suspendedin dichloromethane (20 mL) and treated with phenyl phosphodichloridate(1.51 mL, 10.15 mmol) at −78° C. under an atmosphere of argon.Diisopropylethylamine (2.6 mL, 20.27 mmol) was added dropwise. Themixture was stirred at −78° C. for 30 minutes, then allowed to warm toroom temperature for 1 hr. The mixture was chilled to −5° C. and methylpantothenate (1.6 mL, 20.27 mmol) was added dropwise in dichloromethane.N-methylimidazole (1.6 mL, 20.27 mmol) was added, and after stirring at−5° C. for 30 mins and room temperature for 1 hour, 2 mL of methanol wasadded. The mixture was washed sequentially with water (30 mL), 5% citricacid (30 mL), and brine (10 mL). The organic phase was dried (Na₂SO₄)and the solvent was removed under reduced pressure. Purification wasachieved with a 1:1 mixture of EtOAc:hexane to afford the product as aclear colorless oil. (1.1 g, 24% yield). HPLC showed the product, as a1:1 mixture of disastereomers, having a purity of 97%. ¹H NMR (300 MHz,CDCl₃): δ 1.11 (s, 3H, CH₃), 1.27, 1.39 and 1.40 (2 Ss, 3H, CH₃), 1.41(overlapping d, 3H, J=1.2 Hz, CHCH₃), 3.55 (m, 2H, CH₂), 3.60 (m, 1H,CH₂), 3.63 (m, 1H, CH), 3.66 and 3.68 (2 Ss, 3H, COCH₃), 3.70 and 3.74(2 Ss, 3H, COCH₃), 3.78 (m, 1H CH), 4.03 (m, 1H, CH), 4.17 (m, 1H, CH),7.16 and 7.35 and 7.40 (2 Ms, 5H, Ph). Expected Mol. Wt. 474.18,Observed Mol. Wt. 475.03 (M+H⁺].

Examples 3-14

The compounds shown in the table below were prepared according to thesynthetic procedures outlined in Examples 1 and 2, using the appropriatestarting materials.

Observed R Mass Isolated Purity Expected Mol. Wt. Example (Amino Acid)R′ R″ (g) (%) Mol. Wt. [M + H⁺] 3 Me (L-Ala) n-Bu n-Bu 0.34 91 558.27559.24 4 Me (L-Ala) Bn Et 1.87 97 564.22 565.07 5 Me (L-Ala) Et Bn 1.3697 564.22 565.14 6 Me (L-Ala) Bn Bn 1.38 98 626.24 627.32 7 Me (L-Ala)MeCyPr MeCyPr 1.77 100 554.24 555.23 8 H (Gly) Bn Et 0.44 93 550.21551.02 9 i-Pr (L-Val) Et Et 0.39 94 530.24 531.14 10 MeIndole (L-Trp) MeMe 1.43 95 589.22 590.16 11 MeIndole (L-Trp) Et Et 0.45 95 617.25 618.2112 MeIndole (L-Trp) Bn Et 0.47 91 679.27 680.17 13 MeIndole (L-Trp) EtBn 1.33 95 679.27 680.17 14 MeIndole (L-Trp) Bn Bn 0.13 90 741.28 742.24

Example 15 In Vitro Bacterial Testing

SJ16 is a strain of Escherichia coli that requires addition ofpantothenic acid to proliferate (i.e., it has a mutation such thatpantothenic acid is inactive). Thus, it serves as a useful assay indetermining whether a compound can rescue an organism deficient in PANK,the cause of PKAN. Compounds of the present invention were tested fortoxicity and for the ability to support growth of Escherichia coli K-12strains SJ16 (see, e.g., Jackowski et al., J. Bacteriol., 148, 926-932,1981) and DV70 (see, e.g., Vallari et al., J. Bacteriol., 169,5795-5800, 1987) under permissive and non-permissive conditions. Thetest compound in a solvent (dimethylsulfoxide, DMSO) was added to growthmedium at a final concentration of 8 μM. Solvent alone (DMSO) was addedto the growth medium at a final concentration ≦0.1% as a control.

Strain SJ16 was grown at 37° C. for 18 hours on a solid mediumcontaining agar (1.5%), M9 minimal essential salts (see, Miller,Experiments in Molecular Genetics. Cold Spring Harbor Laboratory, ColdSpring Harbor, N.Y., 1972), glucose (0.4%), methionine (50 μg/ml), andwith (permissive) or without (non-permissive) calcium pantothenate (1μM). Lack of growth with calcium pantothenate supplementation indicatedtoxicity. Growth without calcium pantothenate supplementation indicatedthe ability of the bacteria to metabolize the compound to yieldpantothenate or β-alanine.

Strain DV70 was grown at 30° C. (permissive) or 42° C. (non-permissive)for 18 hours on solid medium containing agar (1.5%), M9 minimalessential salts, glucose (0.4%), methionine (50 μg/ml), and calciumpantothenate (1 μM). Lack of growth at 30° C. indicated toxicity. Growthat 42° C. indicated metabolism of the compound and subsequent conversionto coenzyme A by the bacteria.

SJ16 recovery results for the compounds of Examples 2, 5, 7 and 12 areshown in the Table below. A “Yes” result indicates that bacteria werealive after 18 hours. The compounds of Examples 2, 5, 7 and 12 did notresult in recovery of the DV70 strain.

SJ16 Example DMSO Used Recovery 2 <10% Yes 5 >50% Yes 7 >60% Yes 12 >70%Yes* *test compound precipitated

Example 16

The compounds of Examples 2, 5, 7 and 12 were tested in immortalizedhuman cells (HEK 293T). The amount of acetyl-CoA (the downstream resultof PANK) following administration of the compounds of Examples 2, 5, 7and 12 were measured by mass spectrometry. The results are shown in FIG.1.

As can be seen from FIG. 1, treatment of HEK 293T cells with 200 μM ofthe compound of Example 2 afforded a 42% increase in acetyl CoA overbaseline (p<0.0005). Treatment of HEK 293T cells with 20 μM of thecompound of Example 7 afforded a 38% increase in acetyl CoA overbaseline (p<0.005).

Example 17 In Vivo Testing

Compounds of the invention were tested for efficacy in Pank1^(−/−) mice(strain 129SvJ×C57BL/6J background) which were compared with age-matchedPank1^(+/+) (strain 129SvJ×C57BL/6J) littermates, ages 8-12 weeks. Eachmouse was identified with a coded ear tag and weighed on the first dayof testing. Each compound was administered to 4-5 mice byintraperitoneal injection at a dose of 1.2 μmoles/g body weight in 5 μLdimethylsulfoxide once daily for 5 days, and mice were then fastedovernight, weighed and euthanized. Untreated mice received 5 μLdimethylsulfoxide once daily for 5 days and then were fasted overnightprior to weighing and euthanasia. Livers were excised from each mouse,aliquots were snap-frozen in liquid nitrogen, and stored at −80° C.Within 7 days, liver samples were thawed on ice, weighed and analyzedfor coenzyme A content as described below. Efficacy was indicated by astatistically significant increase in the liver Coenzyme A levels in thePank1^(−/−) mice as compared to the liver from untreated Pank1^(−/−)mice and by equivalence in comparison with Coenzyme A levels inuntreated Pank1^(+/+) mice.

CoA Measurements: Extraction of Fibroblasts and Liver and Derivatizationof Coenzyme A Prior to High Pressure Liquid Chromatography (HPLC)

Extraction of fibroblasts or liver was performed by modification of amethod described previously (see, Minkler et al., Anal. Biochem., 376,275-276, 2008). Coenzyme A derivatization was performed by modificationof a method described previously (see, Shimada et al., J. Chromatogr. BBiomed. Appl., 659, 227-241, 1994).

Liver (20-50 mg) was homogenized in 2 mL of 1 mM KOH, and the pH wasadjusted to 12 with 0.25 M KOH. Fibroblasts were scraped off the culturedish and collected in 1 mL of water, which was transferred to 200 μL of0.25 M NaOH. The liver homogenate was then incubated at 55° C. for 2hours and the fibroblast cells were incubated for 1 hour at 55° C. ThepH was adjusted to pH 8 with 1 M Trizma-HCl, and 10 μL of 100 mMmonobromobimane (mBBr, Life Technologies, NY) was added for 2 hours inthe dark. The reaction was acidified with acetic acid, and centrifugedat 500 g for 15 minutes. The supernatant was then added to a2-(2-pyridyl)ethyl column (Supelco) which was equilibrated with 1 mL of50% methanol/2% acetic acid. The column was washed with 2×1 mL 50%methanol/2% acetic acid and 1 mL water. Samples were eluted with 2×1 mL50 mM ammonium formate in 95% ethanol. Samples were evaporated undernitrogen and resuspended in 300 μL of water. Samples were spun through aSpin-X Centrifuge Tube Filter (0.22 μm Cellulose Acetate, Costar) toremove any precipitants before HPLC.

Coenzyme A Quantification by HPLC

The mBBr derivative of Coenzyme A was separated by reverse-phase HPLCusing a Gemini C₁₈ 3 μm column (150×4.60 mm) from Phenomenex (Torrance,Calif.). The chromatography system used was a Waters e2695 separationmodule with a UV/Vis detector and controlled by the Empower 3 software.Solvent A was 50 mM potassium phosphate pH 4.6, and solvent B was 100%acetonitrile. 20 μL of sample was injected onto the column, and the flowrate was 0.5 mL/min. The HPLC program was the following: startingsolvent mixture of 90% A/10% B, 0 to 2 min isocratic with 10% B, 2 to 9min linear gradient from 10% B to 25% B, 9 to 23 min concave gradientfrom 25% B to 40% B, 23 to 25 min linear gradient from 40% to 10%, and25 to 30 min isocratic with 10% B. The detector was set at λ393 nm. Thearea under the mBBr derivatized Coenzyme A peak was integrated and wascompared to a standard concentration curve of mBBr-Coenzyme A preparedfrom commercial Coenzyme A.

FIG. 2 depicts levels of mBBr CoA in PANK knockout mice followingadministration of the compound of Example 2. As can be seen from FIG. 2,the compound of Example 2 restored levels of CoA to those seen in normalmice. This is also shown in the Table below.

pmol mBBR-CoA/mg Liver Mean SEM n WT 522.545 18.279 4 pank1 KO 339.56011.496 5 pank 1 KO + 563.358 44.959 5 Example 2

All publications, patents, and patent applications cited herein arehereby incorporated by reference.

1-7. (canceled)
 8. A method of treating: (a) a disorder associated witha deficiency of pantothenate kinase, 4′-phosphopantothenate, or CoenzymeA in a subject; (b) pantothenate kinase-associated neurodegeneration ina subject; (c) cells or tissue involved in a pathology characterized byabnormal neuronal function in a subject; (d) cells or tissues involvedin a pathology characterized by dysfunctional neuronal cells caused bymisregulation of the gene associated with the enzyme pantothene kinasein a subject; (e) a pathology characterized by dysfunctional neuronalcells caused by misregulation of the gene associated with the enzymepantothene kinase in a subject; (f) cells or tissues involved in apathology characterized by dysfunctional neuronal cells caused bymisregulation of the expression of the gene associated with the enzymepantothene kinase in a subject; (g) a pathology characterized bydysfunctional neuronal cells caused by misregulation of the expressionof the gene associated with the enzyme pantothene kinase in a subject;or (h) a subject having neuronal cells with an over accumulation ofiron; the method comprising administering to the subject an effectiveamount of a compound having the formula:

or a pharmaceutically acceptable salt thereof, selected from the groupconsisting of: R (Amino Acid) R′ R″ Me (L-Ala) Me Me Me (L-Ala) Et Bn Me(L-Ala) MeCyPr MeCyPr MeIndole (L-Trp) Bn Et


9. (canceled)
 10. The method of claim 8, wherein in step (b) the subjectsuffers from neurodegeneration with brain iron accumulation. 11-23.(canceled)
 24. The method of claim 8, wherein R, R′ and R″ are methyl.25. The method of claim 8, wherein R is methyl, R′ is ethyl and R″ isbenzyl.
 26. The method of claim 8, wherein R is methyl, and R′ and R″are methylcyclopropyl.
 27. The method of claim 8, wherein R is1H-indol-3yl-methyl, R′ is benzyl and R″ is ethyl.
 28. The method ofclaim 8, wherein the subject is a child.
 29. The method of claim 28,wherein the child is 10 to 15 years old.
 30. The method of claim 8,wherein the subject is an adult.
 31. A method of treating a disorderassociated with a deficiency of pantothenate kinase,4′-phosphopantothenate, or Coenzyme A in a subject, the methodcomprising administering to the subject an effective amount of acompound having the formula:

or a pharmaceutically acceptable salt thereof, selected from: R (AminoAcid) R′ R″ Me (L-Ala) Me Me Me (L-Ala) Et Bn Me (L-Ala) MeCyPr MeCyPrMeIndole (L-Trp) Bn Et


32. The method of claim 31, wherein R, R′ and R″ are methyl.
 33. Themethod of claim 31, wherein R is methyl, R′ is ethyl and R″ is benzyl.34. The method of claim 31, wherein R is methyl, and R′ and R″ aremethylcyclopropyl.
 35. The method of claim 31, wherein R is1H-indol-3yl-methyl, R′ is benzyl and R″ is ethyl.
 36. The method ofclaim 31, wherein the subject is a child.
 37. The method of claim 36,wherein the child is 10 to 15 years old.
 38. The method of claim 31,wherein the subject is an adult.